Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 INIP-202ENST00000374236 874 ntTSL 2 BASIC24.45■■□□□ 1.5
BRD4O60885 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
BRD4O60885 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
BRD4O60885 AC092910.1-201ENST00000482027 1129 ntBASIC24.45■■□□□ 1.5
BRD4O60885 RPS29-206ENST00000557111 488 ntTSL 2 BASIC24.45■■□□□ 1.5
BRD4O60885 RNF151-202ENST00000569210 853 ntTSL 2 BASIC24.45■■□□□ 1.5
BRD4O60885 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
BRD4O60885 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
BRD4O60885 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
BRD4O60885 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
BRD4O60885 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
BRD4O60885 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
BRD4O60885 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC24.45■■□□□ 1.5
BRD4O60885 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC24.45■■□□□ 1.5
BRD4O60885 PMPCAP1-201ENST00000508114 1576 ntBASIC24.45■■□□□ 1.5
BRD4O60885 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC24.45■■□□□ 1.5
BRD4O60885 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
BRD4O60885 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
BRD4O60885 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC24.45■■□□□ 1.5
BRD4O60885 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
BRD4O60885 AC067852.2-201ENST00000590513 2313 ntBASIC24.44■■□□□ 1.5
BRD4O60885 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 KRT18P27-201ENST00000427733 1299 ntBASIC24.44■■□□□ 1.5
BRD4O60885 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC24.44■■□□□ 1.5
BRD4O60885 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC24.44■■□□□ 1.5
BRD4O60885 ETFA-208ENST00000559602 792 ntTSL 3 BASIC24.44■■□□□ 1.5
BRD4O60885 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC24.44■■□□□ 1.5
BRD4O60885 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
BRD4O60885 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC24.44■■□□□ 1.5
BRD4O60885 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
BRD4O60885 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC24.44■■□□□ 1.5
BRD4O60885 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC24.44■■□□□ 1.5
BRD4O60885 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
BRD4O60885 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC24.43■■□□□ 1.5
BRD4O60885 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC24.43■■□□□ 1.5
BRD4O60885 MSRA-206ENST00000521209 814 ntTSL 3 BASIC24.43■■□□□ 1.5
BRD4O60885 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC24.43■■□□□ 1.5
BRD4O60885 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.43■■□□□ 1.5
BRD4O60885 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
BRD4O60885 CYGB-205ENST00000590175 830 ntTSL 3 BASIC24.43■■□□□ 1.5
BRD4O60885 AL356488.2-201ENST00000602755 427 ntBASIC24.43■■□□□ 1.5
BRD4O60885 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC24.43■■□□□ 1.5
BRD4O60885 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC24.43■■□□□ 1.5
BRD4O60885 AD001527.2-201ENST00000622994 785 ntBASIC24.43■■□□□ 1.5
BRD4O60885 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
BRD4O60885 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
BRD4O60885 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC24.43■■□□□ 1.5
BRD4O60885 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
BRD4O60885 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC24.43■■□□□ 1.5
BRD4O60885 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC24.43■■□□□ 1.5
BRD4O60885 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
BRD4O60885 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BRD4O60885 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC24.42■■□□□ 1.5
BRD4O60885 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC24.42■■□□□ 1.5
BRD4O60885 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BRD4O60885 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
BRD4O60885 AC005104.2-201ENST00000427818 678 ntBASIC24.42■■□□□ 1.5
BRD4O60885 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC24.42■■□□□ 1.5
BRD4O60885 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC24.42■■□□□ 1.5
BRD4O60885 PRYP5-201ENST00000451909 266 ntBASIC24.42■■□□□ 1.5
BRD4O60885 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC24.42■■□□□ 1.5
BRD4O60885 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
BRD4O60885 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
BRD4O60885 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BRD4O60885 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC24.42■■□□□ 1.5
BRD4O60885 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BRD4O60885 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
BRD4O60885 AC006116.8-202ENST00000587620 1550 ntBASIC24.42■■□□□ 1.5
BRD4O60885 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
BRD4O60885 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
BRD4O60885 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms