Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
KLHL41O60662 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHL41O60662 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KLHL41O60662 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
KLHL41O60662 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHL41O60662 AL163051.1-201ENST00000569214 1512 ntBASIC17.64■□□□□ 0.41
KLHL41O60662 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL41O60662 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.64■□□□□ 0.41
KLHL41O60662 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHL41O60662 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.64■□□□□ 0.41
KLHL41O60662 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
KLHL41O60662 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.64■□□□□ 0.41
KLHL41O60662 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
KLHL41O60662 LINC00602-201ENST00000629776 2065 ntBASIC17.63■□□□□ 0.41
KLHL41O60662 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
KLHL41O60662 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
KLHL41O60662 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.63■□□□□ 0.41
KLHL41O60662 MIR149-201ENST00000384879 89 ntBASIC17.63■□□□□ 0.41
KLHL41O60662 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 PCED1CP-201ENST00000419887 785 ntBASIC17.63■□□□□ 0.41
KLHL41O60662 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.63■□□□□ 0.41
KLHL41O60662 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.63■□□□□ 0.41
KLHL41O60662 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.63■□□□□ 0.41
KLHL41O60662 IER3-202ENST00000376377 1350 ntBASIC17.63■□□□□ 0.41
KLHL41O60662 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
KLHL41O60662 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
KLHL41O60662 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.63■□□□□ 0.41
KLHL41O60662 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
KLHL41O60662 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
KLHL41O60662 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
KLHL41O60662 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL41O60662 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.62■□□□□ 0.41
KLHL41O60662 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.62■□□□□ 0.41
KLHL41O60662 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
KLHL41O60662 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.62■□□□□ 0.41
KLHL41O60662 AC009947.2-201ENST00000444014 672 ntBASIC17.62■□□□□ 0.41
KLHL41O60662 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.62■□□□□ 0.41
KLHL41O60662 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
KLHL41O60662 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.62■□□□□ 0.41
KLHL41O60662 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
KLHL41O60662 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.62■□□□□ 0.41
KLHL41O60662 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.62■□□□□ 0.41
KLHL41O60662 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
KLHL41O60662 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms