Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SPTLC1O15269 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.97■□□□□ 0.63
SPTLC1O15269 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPTLC1O15269 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.96■□□□□ 0.63
SPTLC1O15269 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
SPTLC1O15269 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.96■□□□□ 0.63
SPTLC1O15269 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SPTLC1O15269 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.96■□□□□ 0.63
SPTLC1O15269 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.96■□□□□ 0.63
SPTLC1O15269 AL590627.1-203ENST00000421194 1026 ntBASIC18.96■□□□□ 0.63
SPTLC1O15269 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SPTLC1O15269 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 SART3-203ENST00000546611 1184 ntBASIC18.96■□□□□ 0.63
SPTLC1O15269 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.96■□□□□ 0.63
SPTLC1O15269 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.96■□□□□ 0.63
SPTLC1O15269 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.96■□□□□ 0.63
SPTLC1O15269 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.96■□□□□ 0.63
SPTLC1O15269 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.96■□□□□ 0.63
SPTLC1O15269 AD001527.2-201ENST00000622994 785 ntBASIC18.96■□□□□ 0.63
SPTLC1O15269 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.96■□□□□ 0.63
SPTLC1O15269 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SPTLC1O15269 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.96■□□□□ 0.63
SPTLC1O15269 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SPTLC1O15269 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 HLA-A-201ENST00000376802 1334 ntBASIC18.96■□□□□ 0.63
SPTLC1O15269 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPTLC1O15269 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SPTLC1O15269 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.95■□□□□ 0.62
SPTLC1O15269 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SPTLC1O15269 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SPTLC1O15269 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
SPTLC1O15269 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTLC1O15269 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.95■□□□□ 0.62
SPTLC1O15269 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTLC1O15269 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.95■□□□□ 0.62
SPTLC1O15269 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.95■□□□□ 0.62
SPTLC1O15269 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTLC1O15269 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.95■□□□□ 0.62
SPTLC1O15269 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.95■□□□□ 0.62
SPTLC1O15269 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.95■□□□□ 0.62
SPTLC1O15269 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SPTLC1O15269 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SPTLC1O15269 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SPTLC1O15269 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SPTLC1O15269 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.95■□□□□ 0.62
SPTLC1O15269 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 PMPCAP1-201ENST00000508114 1576 ntBASIC18.94■□□□□ 0.62
SPTLC1O15269 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.94■□□□□ 0.62
SPTLC1O15269 AL049757.1-201ENST00000616842 1596 ntBASIC18.94■□□□□ 0.62
SPTLC1O15269 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.94■□□□□ 0.62
SPTLC1O15269 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.94■□□□□ 0.62
SPTLC1O15269 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.94■□□□□ 0.62
SPTLC1O15269 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SPTLC1O15269 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.94■□□□□ 0.62
SPTLC1O15269 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.94■□□□□ 0.62
SPTLC1O15269 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.94■□□□□ 0.62
SPTLC1O15269 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SPTLC1O15269 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SPTLC1O15269 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SPTLC1O15269 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms