Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP17L11C9JVI0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
USP17L11C9JVI0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
USP17L11C9JVI0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 GPX1P2-201ENST00000429271 606 ntBASIC20.51■□□□□ 0.87
USP17L11C9JVI0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 DNAJB3-201ENST00000446806 729 ntBASIC20.51■□□□□ 0.87
USP17L11C9JVI0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
USP17L11C9JVI0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 BICD1-207ENST00000551848 1962 ntBASIC20.5■□□□□ 0.87
USP17L11C9JVI0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 AC112482.1-201ENST00000492080 688 ntBASIC20.5■□□□□ 0.87
USP17L11C9JVI0 AC136632.2-201ENST00000512891 861 ntBASIC20.5■□□□□ 0.87
USP17L11C9JVI0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 MIR3687-2-201ENST00000577708 61 ntBASIC20.5■□□□□ 0.87
USP17L11C9JVI0 MIR3687-1-201ENST00000614492 61 ntBASIC20.5■□□□□ 0.87
USP17L11C9JVI0 AL589182.2-201ENST00000619332 1049 ntBASIC20.5■□□□□ 0.87
USP17L11C9JVI0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.5■□□□□ 0.87
USP17L11C9JVI0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
USP17L11C9JVI0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 AL020989.1-201ENST00000422979 469 ntBASIC20.49■□□□□ 0.87
USP17L11C9JVI0 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.49■□□□□ 0.87
USP17L11C9JVI0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP17L11C9JVI0 AL353593.2-201ENST00000602529 1483 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms