Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 AC109462.3-201ENST00000573934 613 ntBASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 AC017083.2-201ENST00000608069 979 ntBASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.43■□□□□ 0.86
TMEM88BA6NKF7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 AL499627.1-201ENST00000569373 2188 ntBASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 AC010336.2-201ENST00000564226 506 ntBASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
TMEM88BA6NKF7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 MIR6080-201ENST00000617359 66 ntBASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 UXT-AS1-201ENST00000590504 1525 ntBASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
TMEM88BA6NKF7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 KRT8P23-201ENST00000560090 1207 ntBASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TMEM88BA6NKF7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.39■□□□□ 0.86
TMEM88BA6NKF7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
TMEM88BA6NKF7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM88BA6NKF7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.39■□□□□ 0.86
TMEM88BA6NKF7 PKD1P6-201ENST00000343738 4769 ntBASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 AC009336.1-201ENST00000608941 1553 ntBASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEM88BA6NKF7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms