Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 AC099398.1-201ENST00000567919 2776 ntBASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRIM49BA6NDI0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 AC022616.7-201ENST00000525383 220 ntBASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRIM49BA6NDI0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRIM49BA6NDI0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 DUX4L26-201ENST00000489078 1255 ntBASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.52■□□□□ 0.72
TRIM49BA6NDI0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.71
TRIM49BA6NDI0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.51■□□□□ 0.71
TRIM49BA6NDI0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms