Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP17L4A6NCW7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
USP17L4A6NCW7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP17L4A6NCW7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.28■■□□□ 1
USP17L4A6NCW7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.28■■□□□ 1
USP17L4A6NCW7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 AL138781.2-201ENST00000617896 1843 ntBASIC21.27■■□□□ 1
USP17L4A6NCW7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.27■■□□□ 1
USP17L4A6NCW7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21.27■■□□□ 1
USP17L4A6NCW7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.27■■□□□ 1
USP17L4A6NCW7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC21.27■■□□□ 1
USP17L4A6NCW7 AC109462.3-201ENST00000573934 613 ntBASIC21.27■■□□□ 1
USP17L4A6NCW7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
USP17L4A6NCW7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.27■□□□□ 0.99
USP17L4A6NCW7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 MKNK2P1-201ENST00000437526 628 ntBASIC21.26■□□□□ 0.99
USP17L4A6NCW7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 GPR89P-201ENST00000407924 1495 ntBASIC21.26■□□□□ 0.99
USP17L4A6NCW7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
USP17L4A6NCW7 AC104581.1-202ENST00000635932 2618 ntBASIC21.25■□□□□ 0.99
USP17L4A6NCW7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 IGLL3P-201ENST00000412472 434 ntBASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AL078644.1-201ENST00000609881 752 ntBASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AL805961.1-202ENST00000641562 540 ntBASIC21.25■□□□□ 0.99
USP17L4A6NCW7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
USP17L4A6NCW7 AL096828.2-201ENST00000567259 1965 ntBASIC21.25■□□□□ 0.99
USP17L4A6NCW7 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 CNN2P11-201ENST00000429351 262 ntBASIC21.24■□□□□ 0.99
USP17L4A6NCW7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 AC010654.1-201ENST00000615722 808 ntBASIC21.24■□□□□ 0.99
USP17L4A6NCW7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
USP17L4A6NCW7 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms