Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV18A0A075B6X5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 AL355802.2-201ENST00000402069 882 ntBASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 CA15P1-201ENST00000481698 905 ntBASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 LINC01451-201ENST00000623792 534 ntBASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV18A0A075B6X5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 PCDH8P1-201ENST00000428983 2773 ntBASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TRAV18A0A075B6X5 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 ESRRAP1-201ENST00000400596 1257 ntBASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 AC046158.3-201ENST00000624947 2558 ntBASIC15.26■□□□□ 0.03
TRAV18A0A075B6X5 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms