Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CLIC4Q9Y696 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLIC4Q9Y696 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.27■□□□□ 0.83
CLIC4Q9Y696 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLIC4Q9Y696 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 PRORSD1P-202ENST00000563365 2154 ntBASIC20.25■□□□□ 0.83
CLIC4Q9Y696 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CLIC4Q9Y696 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.24■□□□□ 0.83
CLIC4Q9Y696 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 HTR7P1-202ENST00000624664 4411 ntBASIC20.23■□□□□ 0.83
CLIC4Q9Y696 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 DUX4L26-201ENST00000489078 1255 ntBASIC20.23■□□□□ 0.83
CLIC4Q9Y696 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CLIC4Q9Y696 AC022616.7-201ENST00000525383 220 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms