Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SMC3Q9UQE7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 AL596275.1-201ENST00000423464 877 ntBASIC20.87■□□□□ 0.93
SMC3Q9UQE7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 DDX43P3-201ENST00000441064 443 ntBASIC20.87■□□□□ 0.93
SMC3Q9UQE7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 RASA4DP-201ENST00000460726 1199 ntBASIC20.87■□□□□ 0.93
SMC3Q9UQE7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 AC079602.3-201ENST00000623931 403 ntBASIC20.87■□□□□ 0.93
SMC3Q9UQE7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMC3Q9UQE7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.86■□□□□ 0.93
SMC3Q9UQE7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 AL391807.1-203ENST00000604392 2365 ntBASIC20.86■□□□□ 0.93
SMC3Q9UQE7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 AC140113.3-201ENST00000605663 199 ntBASIC20.86■□□□□ 0.93
SMC3Q9UQE7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 AD000864.1-201ENST00000624076 2295 ntBASIC20.86■□□□□ 0.93
SMC3Q9UQE7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMC3Q9UQE7 AC022211.2-201ENST00000585075 2527 ntBASIC20.85■□□□□ 0.93
SMC3Q9UQE7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 AL136038.4-201ENST00000603606 1261 ntBASIC20.85■□□□□ 0.93
SMC3Q9UQE7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SMC3Q9UQE7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMC3Q9UQE7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms