Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 AC009949.1-201ENST00000623048 1830 ntBASIC18.65■□□□□ 0.58
CHD7Q9P2D1 FO538757.1-201ENST00000623083 1397 ntBASIC18.65■□□□□ 0.58
CHD7Q9P2D1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 TFAMP1-201ENST00000412727 736 ntBASIC18.65■□□□□ 0.58
CHD7Q9P2D1 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.65■□□□□ 0.58
CHD7Q9P2D1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHD7Q9P2D1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.64■□□□□ 0.58
CHD7Q9P2D1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.64■□□□□ 0.58
CHD7Q9P2D1 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CHD7Q9P2D1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHD7Q9P2D1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.64■□□□□ 0.58
CHD7Q9P2D1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 TIMM8BP1-201ENST00000452384 211 ntBASIC18.64■□□□□ 0.57
CHD7Q9P2D1 SPDYE22P-201ENST00000582158 798 ntBASIC18.64■□□□□ 0.57
CHD7Q9P2D1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 ANO7L1-203ENST00000602586 1720 ntBASIC18.64■□□□□ 0.57
CHD7Q9P2D1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 OR8S1-201ENST00000310194 1080 ntBASIC18.64■□□□□ 0.57
CHD7Q9P2D1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 AC097637.2-201ENST00000624096 1997 ntBASIC18.64■□□□□ 0.57
CHD7Q9P2D1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CHD7Q9P2D1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 AC019129.2-201ENST00000609837 1235 ntBASIC18.63■□□□□ 0.57
CHD7Q9P2D1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 GMCL1P1-201ENST00000463439 1581 ntBASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CNN2P2-201ENST00000443536 909 ntBASIC18.63■□□□□ 0.57
CHD7Q9P2D1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CNN2P3-201ENST00000450201 906 ntBASIC18.63■□□□□ 0.57
CHD7Q9P2D1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 AL136317.3-201ENST00000618497 906 ntBASIC18.63■□□□□ 0.57
CHD7Q9P2D1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 AC006116.8-202ENST00000587620 1550 ntBASIC18.63■□□□□ 0.57
CHD7Q9P2D1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 GPS2P2-201ENST00000430745 888 ntBASIC18.63■□□□□ 0.57
CHD7Q9P2D1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHD7Q9P2D1 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms