Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
SLC52A1Q9NWF4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
SLC52A1Q9NWF4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SLC52A1Q9NWF4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC25.2■■□□□ 1.63
SLC52A1Q9NWF4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
SLC52A1Q9NWF4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
SLC52A1Q9NWF4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 AC004449.1-201ENST00000564240 433 ntBASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC25.2■■□□□ 1.62
SLC52A1Q9NWF4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 ADH5P3-201ENST00000433842 1137 ntBASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 AC093512.1-201ENST00000617969 520 ntBASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SLC52A1Q9NWF4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 POR-209ENST00000439269 1858 ntTSL 2 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 AC023141.5-201ENST00000458585 616 ntBASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 AC025678.2-201ENST00000562061 970 ntBASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC25.18■■□□□ 1.62
SLC52A1Q9NWF4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC25.17■■□□□ 1.62
SLC52A1Q9NWF4 PAWRP1-201ENST00000451083 565 ntBASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms