Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBQLN4Q9NRR5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN4Q9NRR5 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.33■□□□□ 0.21
UBQLN4Q9NRR5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN4Q9NRR5 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBQLN4Q9NRR5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.33■□□□□ 0.21
UBQLN4Q9NRR5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 AL845331.1-201ENST00000424978 1190 ntBASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 DRAXINP1-201ENST00000437611 948 ntBASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 LINC01451-201ENST00000623792 534 ntBASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 AL355312.1-201ENST00000407115 2176 ntBASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.33■□□□□ 0.2
UBQLN4Q9NRR5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 AC125634.1-201ENST00000438758 1403 ntBASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 PCDHB18P-201ENST00000524813 2368 ntBASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 AC005332.8-201ENST00000622750 2735 ntBASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 PKD1P1-201ENST00000458669 6805 ntBASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBQLN4Q9NRR5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms