Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 AC104581.1-202ENST00000635932 2618 ntBASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 AC073621.1-201ENST00000392730 636 ntBASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 KRT18P13-201ENST00000400056 1290 ntBASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 AC140113.2-201ENST00000604370 208 ntBASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 FAM197Y3-203ENST00000618346 717 ntBASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 FLJ13224-201ENST00000313737 1514 ntBASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 KRT18P55-202ENST00000578578 1546 ntBASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 AC009113.1-201ENST00000570267 2443 ntBASIC18.06■□□□□ 0.48
SPHK2Q9NRA0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 MED15P5-201ENST00000423150 992 ntBASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 SIGLEC30P-201ENST00000455569 941 ntBASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 IGHV3-52-201ENST00000519770 353 ntBASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 PGM5P2-202ENST00000637225 1043 ntBASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.05■□□□□ 0.48
SPHK2Q9NRA0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 AL591424.1-201ENST00000442569 1213 ntBASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 STK19B-204ENST00000512515 211 ntBASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 AC136632.2-201ENST00000512891 861 ntBASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 STK25P1-201ENST00000585406 838 ntBASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 AC004706.3-202ENST00000621574 984 ntBASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 AC005593.1-201ENST00000624894 515 ntBASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.04■□□□□ 0.48
SPHK2Q9NRA0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK2Q9NRA0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK2Q9NRA0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK2Q9NRA0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SPHK2Q9NRA0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms