Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 COX11P1-201ENST00000489116 835 ntBASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 AL441883.1-201ENST00000566170 1045 ntBASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TMEM38AQ9H6F2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM38AQ9H6F2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM38AQ9H6F2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM38AQ9H6F2 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.52■□□□□ 0.23
TMEM38AQ9H6F2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM38AQ9H6F2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM38AQ9H6F2 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TMEM38AQ9H6F2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 IGHGP-201ENST00000390555 1178 ntBASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 FAM8A6P-201ENST00000407496 1135 ntBASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 NKILA-202ENST00000614771 2598 ntBASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 LINC01311-201ENST00000565162 1445 ntBASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 AC106820.2-201ENST00000563775 3264 ntBASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM38AQ9H6F2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 AC087499.1-201ENST00000418141 1075 ntBASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 AL596275.1-201ENST00000423464 877 ntBASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SPDYE15P-201ENST00000424157 909 ntBASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 LIN28AP1-201ENST00000429574 405 ntBASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 AC099398.1-201ENST00000567919 2776 ntBASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM38AQ9H6F2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM38AQ9H6F2 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM38AQ9H6F2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
TMEM38AQ9H6F2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM38AQ9H6F2 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms