Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 PRELID1P1-202ENST00000567272 903 ntBASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 AC068880.1-201ENST00000507289 2297 ntBASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 AC007967.3-201ENST00000434308 558 ntBASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 AC099336.1-202ENST00000602961 463 ntBASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 AC010460.3-201ENST00000511359 1579 ntBASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 BX276092.7-203ENST00000637198 1536 ntBASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCM2Q9BSQ5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 AC012317.2-201ENST00000623305 2251 ntBASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 CLEC4GP1-201ENST00000596555 870 ntBASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.46■□□□□ 0.39
CCM2Q9BSQ5 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCM2Q9BSQ5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.46■□□□□ 0.38
CCM2Q9BSQ5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
CCM2Q9BSQ5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCM2Q9BSQ5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.46■□□□□ 0.38
CCM2Q9BSQ5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCM2Q9BSQ5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms