Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCGF1Q9BSM1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 GMCL1P1-201ENST00000463439 1581 ntBASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 TPSP2-201ENST00000561760 610 ntBASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 AL592071.1-201ENST00000611956 408 ntBASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCGF1Q9BSM1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 AL450487.1-201ENST00000426799 995 ntBASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 DRAXINP1-201ENST00000437611 948 ntBASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 VENTXP7-201ENST00000475503 772 ntBASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 AC104819.1-201ENST00000504587 486 ntBASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 AL024508.2-201ENST00000607749 1894 ntBASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 AC124067.4-201ENST00000519691 2379 ntBASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCGF1Q9BSM1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
PCGF1Q9BSM1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms