Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 AC011840.4-201ENST00000578471 627 ntBASIC21.01■□□□□ 0.95
NEK1Q96PY6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.01■□□□□ 0.95
NEK1Q96PY6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NEK1Q96PY6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21■□□□□ 0.95
NEK1Q96PY6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21■□□□□ 0.95
NEK1Q96PY6 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21■□□□□ 0.95
NEK1Q96PY6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21■□□□□ 0.95
NEK1Q96PY6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 AC005336.2-201ENST00000593183 939 ntBASIC21■□□□□ 0.95
NEK1Q96PY6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 AC125634.1-201ENST00000438758 1403 ntBASIC21■□□□□ 0.95
NEK1Q96PY6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC21■□□□□ 0.95
NEK1Q96PY6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21■□□□□ 0.95
NEK1Q96PY6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21■□□□□ 0.95
NEK1Q96PY6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21■□□□□ 0.95
NEK1Q96PY6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
NEK1Q96PY6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 TSSC2-201ENST00000450217 709 ntBASIC20.99■□□□□ 0.95
NEK1Q96PY6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 AC139713.2-201ENST00000641328 2723 ntBASIC20.99■□□□□ 0.95
NEK1Q96PY6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NEK1Q96PY6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.99■□□□□ 0.95
NEK1Q96PY6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 AL138688.1-201ENST00000624851 1594 ntBASIC20.98■□□□□ 0.95
NEK1Q96PY6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 COX5BP2-201ENST00000392354 334 ntBASIC20.98■□□□□ 0.95
NEK1Q96PY6 AC005104.2-201ENST00000427818 678 ntBASIC20.98■□□□□ 0.95
NEK1Q96PY6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 AP000550.4-202ENST00000639755 178 ntBASIC20.98■□□□□ 0.95
NEK1Q96PY6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 AC141586.5-201ENST00000624546 2050 ntBASIC20.98■□□□□ 0.95
NEK1Q96PY6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.98■□□□□ 0.95
NEK1Q96PY6 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NEK1Q96PY6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NEK1Q96PY6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms