Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CNN2P2-201ENST00000443536 909 ntBASIC19.13■□□□□ 0.65
LRCH3Q96II8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 CNN2P3-201ENST00000450201 906 ntBASIC19.13■□□□□ 0.65
LRCH3Q96II8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH3Q96II8 AL136317.3-201ENST00000618497 906 ntBASIC19.13■□□□□ 0.65
LRCH3Q96II8 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC19.13■□□□□ 0.65
LRCH3Q96II8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH3Q96II8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH3Q96II8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.13■□□□□ 0.65
LRCH3Q96II8 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH3Q96II8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH3Q96II8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRCH3Q96II8 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 Z82202.1-201ENST00000623446 1880 ntBASIC19.12■□□□□ 0.65
LRCH3Q96II8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.12■□□□□ 0.65
LRCH3Q96II8 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 AL627223.1-201ENST00000416693 442 ntBASIC19.12■□□□□ 0.65
LRCH3Q96II8 RN7SL692P-201ENST00000464677 288 ntBASIC19.12■□□□□ 0.65
LRCH3Q96II8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.12■□□□□ 0.65
LRCH3Q96II8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRCH3Q96II8 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRCH3Q96II8 IGHV3-71-201ENST00000523324 359 ntBASIC19.12■□□□□ 0.65
LRCH3Q96II8 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.12■□□□□ 0.65
LRCH3Q96II8 SLC25A39P2-201ENST00000537614 270 ntBASIC19.12■□□□□ 0.65
LRCH3Q96II8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.12■□□□□ 0.65
LRCH3Q96II8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LRCH3Q96II8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.12■□□□□ 0.65
LRCH3Q96II8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 LINC00602-201ENST00000629776 2065 ntBASIC19.12■□□□□ 0.65
LRCH3Q96II8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRCH3Q96II8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRCH3Q96II8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRCH3Q96II8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 SIGLEC16-201ENST00000599858 1437 ntBASIC19.1■□□□□ 0.65
LRCH3Q96II8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 SPDYE21P-201ENST00000413323 827 ntBASIC19.1■□□□□ 0.65
LRCH3Q96II8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRCH3Q96II8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRCH3Q96II8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms