Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 AC096633.1-201ENST00000422446 749 ntBASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 AL049597.2-201ENST00000565575 961 ntBASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 AC011498.5-201ENST00000592027 486 ntBASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 AC012313.1-201ENST00000593393 3059 ntBASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RHBDF1Q96CC6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 FAM210CP-201ENST00000445714 574 ntBASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 RN7SL606P-201ENST00000472779 293 ntBASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 GUSBP12-201ENST00000513727 720 ntBASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 AL121956.5-201ENST00000625261 221 ntBASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RHBDF1Q96CC6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 AC108860.2-201ENST00000562760 2183 ntBASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RHBDF1Q96CC6 SIRPAP1-201ENST00000448467 1770 ntBASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.27■□□□□ 0.35
RHBDF1Q96CC6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 AC097374.2-201ENST00000618617 1306 ntBASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RHBDF1Q96CC6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms