Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 COX11P1-201ENST00000489116 835 ntBASIC18.71■□□□□ 0.59
RNF25Q96BH1 AC024563.2-201ENST00000603282 481 ntBASIC18.71■□□□□ 0.59
RNF25Q96BH1 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.71■□□□□ 0.59
RNF25Q96BH1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
RNF25Q96BH1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 AD000864.1-201ENST00000624076 2295 ntBASIC18.71■□□□□ 0.59
RNF25Q96BH1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF25Q96BH1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 AL391807.1-203ENST00000604392 2365 ntBASIC18.7■□□□□ 0.58
RNF25Q96BH1 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 AC011558.1-201ENST00000623459 338 ntBASIC18.7■□□□□ 0.58
RNF25Q96BH1 AC008267.7-201ENST00000624570 1194 ntBASIC18.7■□□□□ 0.58
RNF25Q96BH1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF25Q96BH1 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.7■□□□□ 0.58
RNF25Q96BH1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 SPDYE15P-201ENST00000424157 909 ntBASIC18.69■□□□□ 0.58
RNF25Q96BH1 AL137013.1-201ENST00000432946 1228 ntBASIC18.69■□□□□ 0.58
RNF25Q96BH1 KATNBL1P2-201ENST00000433311 835 ntBASIC18.69■□□□□ 0.58
RNF25Q96BH1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 AL136038.4-201ENST00000603606 1261 ntBASIC18.69■□□□□ 0.58
RNF25Q96BH1 AC139887.4-201ENST00000607877 719 ntBASIC18.69■□□□□ 0.58
RNF25Q96BH1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF25Q96BH1 AC005363.2-201ENST00000618631 242 ntBASIC18.69■□□□□ 0.58
RNF25Q96BH1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF25Q96BH1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RNF25Q96BH1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RNF25Q96BH1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RNF25Q96BH1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RNF25Q96BH1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF25Q96BH1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF25Q96BH1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF25Q96BH1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RNF25Q96BH1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF25Q96BH1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF25Q96BH1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms