Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 IGHV3-41-201ENST00000613121 348 ntBASIC17.09■□□□□ 0.33
UBE2E3Q969T4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
UBE2E3Q969T4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UBE2E3Q969T4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 HLA-J-201ENST00000462773 1622 ntBASIC17.08■□□□□ 0.32
UBE2E3Q969T4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 BX276092.5-203ENST00000456199 560 ntBASIC17.08■□□□□ 0.32
UBE2E3Q969T4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 AL121672.3-201ENST00000608644 468 ntBASIC17.08■□□□□ 0.32
UBE2E3Q969T4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
UBE2E3Q969T4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 AC005332.1-201ENST00000577698 1310 ntBASIC17.07■□□□□ 0.32
UBE2E3Q969T4 AL355312.1-201ENST00000407115 2176 ntBASIC17.07■□□□□ 0.32
UBE2E3Q969T4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 RN7SL606P-201ENST00000472779 293 ntBASIC17.07■□□□□ 0.32
UBE2E3Q969T4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 AC011840.4-201ENST00000578471 627 ntBASIC17.07■□□□□ 0.32
UBE2E3Q969T4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 AL592071.1-201ENST00000611956 408 ntBASIC17.07■□□□□ 0.32
UBE2E3Q969T4 AC124864.1-201ENST00000623408 392 ntBASIC17.07■□□□□ 0.32
UBE2E3Q969T4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
UBE2E3Q969T4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UBE2E3Q969T4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms