Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.34■□□□□ 0.05
USP9XQ93008 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.34■□□□□ 0.05
USP9XQ93008 SPDYE9P-201ENST00000570642 692 ntBASIC15.34■□□□□ 0.05
USP9XQ93008 SPDYE10P-202ENST00000612005 668 ntBASIC15.34■□□□□ 0.05
USP9XQ93008 SPDYE8P-202ENST00000612377 668 ntBASIC15.34■□□□□ 0.05
USP9XQ93008 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.34■□□□□ 0.05
USP9XQ93008 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
USP9XQ93008 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
USP9XQ93008 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP9XQ93008 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP9XQ93008 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP9XQ93008 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
USP9XQ93008 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.34■□□□□ 0.05
USP9XQ93008 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
USP9XQ93008 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.33■□□□□ 0.05
USP9XQ93008 AC005237.2-201ENST00000434368 219 ntBASIC15.33■□□□□ 0.05
USP9XQ93008 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.33■□□□□ 0.05
USP9XQ93008 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.33■□□□□ 0.05
USP9XQ93008 LINC01225-203ENST00000563550 1244 ntBASIC15.33■□□□□ 0.05
USP9XQ93008 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.33■□□□□ 0.05
USP9XQ93008 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
USP9XQ93008 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
USP9XQ93008 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.33■□□□□ 0.05
USP9XQ93008 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP9XQ93008 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
USP9XQ93008 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
USP9XQ93008 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
USP9XQ93008 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
USP9XQ93008 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.33■□□□□ 0.04
USP9XQ93008 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.33■□□□□ 0.04
USP9XQ93008 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.33■□□□□ 0.04
USP9XQ93008 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.33■□□□□ 0.04
USP9XQ93008 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.33■□□□□ 0.04
USP9XQ93008 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.33■□□□□ 0.04
USP9XQ93008 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 GGTLC5P-201ENST00000617623 998 ntBASIC15.33■□□□□ 0.04
USP9XQ93008 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.33■□□□□ 0.04
USP9XQ93008 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
USP9XQ93008 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.33■□□□□ 0.04
USP9XQ93008 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 AL353593.2-201ENST00000602529 1483 ntBASIC15.33■□□□□ 0.04
USP9XQ93008 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
USP9XQ93008 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
USP9XQ93008 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
USP9XQ93008 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.33■□□□□ 0.04
USP9XQ93008 AC125807.1-201ENST00000483097 614 ntBASIC15.32■□□□□ 0.04
USP9XQ93008 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.32■□□□□ 0.04
USP9XQ93008 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.32■□□□□ 0.04
USP9XQ93008 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.32■□□□□ 0.04
USP9XQ93008 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.32■□□□□ 0.04
USP9XQ93008 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
USP9XQ93008 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.32■□□□□ 0.04
USP9XQ93008 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 AC092580.3-201ENST00000430932 139 ntBASIC15.32■□□□□ 0.04
USP9XQ93008 ACA64.2-201ENST00000459014 129 ntBASIC15.32■□□□□ 0.04
USP9XQ93008 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.32■□□□□ 0.04
USP9XQ93008 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
USP9XQ93008 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.32■□□□□ 0.04
USP9XQ93008 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.32■□□□□ 0.04
USP9XQ93008 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.32■□□□□ 0.04
USP9XQ93008 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
USP9XQ93008 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
USP9XQ93008 AL355306.1-201ENST00000415580 579 ntBASIC15.31■□□□□ 0.04
USP9XQ93008 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9XQ93008 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9XQ93008 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9XQ93008 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9XQ93008 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.31■□□□□ 0.04
USP9XQ93008 AC100803.2-201ENST00000562459 1963 ntBASIC15.31■□□□□ 0.04
USP9XQ93008 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
USP9XQ93008 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9XQ93008 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.31■□□□□ 0.04
USP9XQ93008 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
USP9XQ93008 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.31■□□□□ 0.04
USP9XQ93008 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
USP9XQ93008 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms