Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 AC009947.2-201ENST00000444014 672 ntBASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 DUT-205ENST00000558813 769 ntTSL 2 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 AL138688.1-201ENST00000624851 1594 ntBASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RTN4IP1Q8WWV3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 AL121761.2-201ENST00000598007 1648 ntBASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 ECEL1P3-201ENST00000427961 737 ntBASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 SLC25A3P1-201ENST00000443844 931 ntBASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 NEK4P2-201ENST00000580004 1012 ntBASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.97□□□□□ -0.01
RTN4IP1Q8WWV3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 AP000523.1-201ENST00000398242 1049 ntBASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RTN4IP1Q8WWV3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms