Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CHD6Q8TD26 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CHD6Q8TD26 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 RNA5SP412-201ENST00000516234 123 ntBASIC15.79■□□□□ 0.12
CHD6Q8TD26 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 AL118558.3-201ENST00000607414 1079 ntBASIC15.79■□□□□ 0.12
CHD6Q8TD26 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 AL023806.1-201ENST00000603994 1649 ntBASIC15.79■□□□□ 0.12
CHD6Q8TD26 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 TMEM198B-204ENST00000484016 896 ntBASIC15.79■□□□□ 0.12
CHD6Q8TD26 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CHD6Q8TD26 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.79■□□□□ 0.12
CHD6Q8TD26 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 PI4KAP1-204ENST00000612579 1703 ntBASIC15.78■□□□□ 0.12
CHD6Q8TD26 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 AC105129.2-201ENST00000559536 390 ntBASIC15.78■□□□□ 0.12
CHD6Q8TD26 RARRES2P8-201ENST00000566335 367 ntBASIC15.78■□□□□ 0.12
CHD6Q8TD26 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 PDIA3P1-201ENST00000471856 1510 ntBASIC15.78■□□□□ 0.12
CHD6Q8TD26 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.78■□□□□ 0.12
CHD6Q8TD26 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.78■□□□□ 0.12
CHD6Q8TD26 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.78■□□□□ 0.12
CHD6Q8TD26 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.78■□□□□ 0.12
CHD6Q8TD26 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CHD6Q8TD26 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CHD6Q8TD26 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
CHD6Q8TD26 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD6Q8TD26 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CHD6Q8TD26 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD6Q8TD26 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD6Q8TD26 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD6Q8TD26 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.77■□□□□ 0.12
CHD6Q8TD26 AP000842.3-202ENST00000569238 1080 ntBASIC15.77■□□□□ 0.12
CHD6Q8TD26 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CHD6Q8TD26 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CHD6Q8TD26 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD6Q8TD26 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CHD6Q8TD26 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms