Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RETREG2Q8NC44 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETREG2Q8NC44 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RETREG2Q8NC44 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.1■□□□□ 0.81
RETREG2Q8NC44 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 AC073648.2-201ENST00000510116 352 ntBASIC20.1■□□□□ 0.81
RETREG2Q8NC44 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.1■□□□□ 0.81
RETREG2Q8NC44 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 LINC01126-201ENST00000623515 1646 ntBASIC20.09■□□□□ 0.81
RETREG2Q8NC44 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 AC092865.5-201ENST00000545435 363 ntBASIC20.09■□□□□ 0.81
RETREG2Q8NC44 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 AC106730.1-201ENST00000566722 1090 ntBASIC20.09■□□□□ 0.81
RETREG2Q8NC44 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RETREG2Q8NC44 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 GMCL1P1-201ENST00000463439 1581 ntBASIC20.08■□□□□ 0.81
RETREG2Q8NC44 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.08■□□□□ 0.81
RETREG2Q8NC44 AC009154.2-201ENST00000621177 724 ntBASIC20.08■□□□□ 0.81
RETREG2Q8NC44 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.08■□□□□ 0.8
RETREG2Q8NC44 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.08■□□□□ 0.8
RETREG2Q8NC44 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RETREG2Q8NC44 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
RETREG2Q8NC44 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RETREG2Q8NC44 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RETREG2Q8NC44 REXO1L9P-201ENST00000604264 2108 ntBASIC20.08■□□□□ 0.8
RETREG2Q8NC44 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RETREG2Q8NC44 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
RETREG2Q8NC44 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 AC134043.2-201ENST00000624206 2238 ntBASIC20.07■□□□□ 0.8
RETREG2Q8NC44 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.07■□□□□ 0.8
RETREG2Q8NC44 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 TERC-201ENST00000602385 541 ntBASIC20.07■□□□□ 0.8
RETREG2Q8NC44 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RETREG2Q8NC44 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms