Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.07■□□□□ 0.32
LINC01555Q8NAE3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 AL355312.1-201ENST00000407115 2176 ntBASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 AP001269.4-201ENST00000609611 512 ntBASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 REXO1L6P-202ENST00000619970 1078 ntBASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
LINC01555Q8NAE3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 LINC00304-203ENST00000565008 1864 ntBASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 AC005104.2-201ENST00000427818 678 ntBASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 AC103564.2-201ENST00000432853 1299 ntBASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 ABCD1P5-201ENST00000445663 754 ntBASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 EMBP1-201ENST00000458200 901 ntBASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 RN7SL510P-201ENST00000581311 263 ntBASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 AD001527.2-201ENST00000622994 785 ntBASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC01555Q8NAE3 KRT8P10-201ENST00000450021 1447 ntBASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 LINC01711-201ENST00000598340 967 ntBASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 AL691432.3-201ENST00000621860 400 ntBASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 AP000867.4-201ENST00000641616 219 ntBASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC01555Q8NAE3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms