Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 PRYP5-201ENST00000451909 266 ntBASIC13.87□□□□□ -0.19
C3orf56Q8N813 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 AP000344.2-201ENST00000512987 629 ntBASIC13.87□□□□□ -0.19
C3orf56Q8N813 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 NFYC-AS1-201ENST00000606277 1687 ntBASIC13.87□□□□□ -0.19
C3orf56Q8N813 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
C3orf56Q8N813 AC004817.3-201ENST00000602957 2129 ntBASIC13.87□□□□□ -0.19
C3orf56Q8N813 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
C3orf56Q8N813 AL024508.2-201ENST00000607749 1894 ntBASIC13.87□□□□□ -0.19
C3orf56Q8N813 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 AC141586.3-201ENST00000562166 1838 ntBASIC13.86□□□□□ -0.19
C3orf56Q8N813 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 AC005034.1-201ENST00000426657 489 ntBASIC13.86□□□□□ -0.19
C3orf56Q8N813 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 ACTG1P14-201ENST00000446382 1122 ntBASIC13.86□□□□□ -0.19
C3orf56Q8N813 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 MIR4745-201ENST00000577608 62 ntBASIC13.86□□□□□ -0.19
C3orf56Q8N813 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 AC004835.2-201ENST00000603762 682 ntBASIC13.86□□□□□ -0.19
C3orf56Q8N813 AC027612.4-201ENST00000605371 583 ntBASIC13.86□□□□□ -0.19
C3orf56Q8N813 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
C3orf56Q8N813 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
C3orf56Q8N813 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.85□□□□□ -0.19
C3orf56Q8N813 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
C3orf56Q8N813 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.85□□□□□ -0.19
C3orf56Q8N813 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms