Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RN7SL606P-201ENST00000472779 293 ntBASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 AC091607.1-201ENST00000490318 1060 ntBASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 AL353801.3-201ENST00000609898 542 ntBASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 NUS1P2-201ENST00000417358 873 ntBASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 AP002469.2-201ENST00000531724 424 ntBASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCDC33Q8N5R6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC33Q8N5R6 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
CCDC33Q8N5R6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCDC33Q8N5R6 NSUN5P1-202ENST00000421140 1535 ntBASIC18.64■□□□□ 0.58
CCDC33Q8N5R6 NSUN5P2-203ENST00000457352 1529 ntBASIC18.64■□□□□ 0.58
CCDC33Q8N5R6 AC100803.2-201ENST00000562459 1963 ntBASIC18.64■□□□□ 0.58
CCDC33Q8N5R6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 AC134043.2-201ENST00000624206 2238 ntBASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 AC106820.2-201ENST00000563775 3264 ntBASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 AL022342.1-201ENST00000400363 863 ntBASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 AP005901.3-202ENST00000581653 237 ntBASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCDC33Q8N5R6 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 MRPL3P1-201ENST00000400109 1033 ntBASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 VENTXP7-201ENST00000475503 772 ntBASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 SLC25A6P4-201ENST00000586535 553 ntBASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC33Q8N5R6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms