Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.74■□□□□ 0.43
LDB1Q86U70 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB1Q86U70 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LDB1Q86U70 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB1Q86U70 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.74■□□□□ 0.43
LDB1Q86U70 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LDB1Q86U70 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB1Q86U70 AC005332.1-201ENST00000577698 1310 ntBASIC17.73■□□□□ 0.43
LDB1Q86U70 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB1Q86U70 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB1Q86U70 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LDB1Q86U70 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB1Q86U70 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LDB1Q86U70 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LDB1Q86U70 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB1Q86U70 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.73■□□□□ 0.43
LDB1Q86U70 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.73■□□□□ 0.43
LDB1Q86U70 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.73■□□□□ 0.43
LDB1Q86U70 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.73■□□□□ 0.43
LDB1Q86U70 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB1Q86U70 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB1Q86U70 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LDB1Q86U70 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LDB1Q86U70 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LDB1Q86U70 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.73■□□□□ 0.43
LDB1Q86U70 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LDB1Q86U70 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.72■□□□□ 0.43
LDB1Q86U70 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB1Q86U70 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LDB1Q86U70 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LDB1Q86U70 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 LINC00304-203ENST00000565008 1864 ntBASIC17.72■□□□□ 0.43
LDB1Q86U70 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB1Q86U70 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB1Q86U70 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.72■□□□□ 0.43
LDB1Q86U70 FAM86EP-206ENST00000510506 987 ntBASIC17.72■□□□□ 0.43
LDB1Q86U70 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.72■□□□□ 0.43
LDB1Q86U70 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.72■□□□□ 0.43
LDB1Q86U70 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.72■□□□□ 0.43
LDB1Q86U70 AC087388.1-201ENST00000571370 1112 ntBASIC17.72■□□□□ 0.43
LDB1Q86U70 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.72■□□□□ 0.43
LDB1Q86U70 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.72■□□□□ 0.43
LDB1Q86U70 AC116407.2-201ENST00000613639 860 ntBASIC17.72■□□□□ 0.43
LDB1Q86U70 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB1Q86U70 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB1Q86U70 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
LDB1Q86U70 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.72■□□□□ 0.43
LDB1Q86U70 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.72■□□□□ 0.43
LDB1Q86U70 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LDB1Q86U70 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
LDB1Q86U70 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 AL645608.8-201ENST00000606034 2086 ntBASIC17.71■□□□□ 0.43
LDB1Q86U70 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LDB1Q86U70 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB1Q86U70 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LDB1Q86U70 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LDB1Q86U70 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB1Q86U70 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LDB1Q86U70 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
LDB1Q86U70 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.71■□□□□ 0.43
LDB1Q86U70 AL121956.5-201ENST00000625261 221 ntBASIC17.71■□□□□ 0.43
LDB1Q86U70 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.71■□□□□ 0.43
LDB1Q86U70 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LDB1Q86U70 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.71■□□□□ 0.43
LDB1Q86U70 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LDB1Q86U70 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.71■□□□□ 0.43
LDB1Q86U70 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms