Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 RN7SL204P-201ENST00000582831 262 ntBASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 ADM-208ENST00000534464 1640 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 CD99-202ENST00000381180 530 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC135776.1-201ENST00000319817 2481 ntBASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC004790.2-201ENST00000623588 572 ntBASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC093010.1-201ENST00000473625 1624 ntBASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC098818.2-201ENST00000564925 2320 ntBASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC005034.1-201ENST00000426657 489 ntBASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC019129.2-201ENST00000609837 1235 ntBASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
VPS13BQ7Z7G8 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AC063926.2-201ENST00000623766 1308 ntBASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AP000974.1-201ENST00000623909 2387 ntBASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AL020989.1-201ENST00000422979 469 ntBASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AP005018.1-201ENST00000525475 301 ntBASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AC004449.1-201ENST00000564240 433 ntBASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AC099522.2-201ENST00000607001 744 ntBASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 AL008721.1-201ENST00000609964 604 ntBASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
VPS13BQ7Z7G8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms