Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 AP002469.2-201ENST00000531724 424 ntBASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 AD001527.2-201ENST00000622994 785 ntBASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.8■□□□□ 0.44
GDPD4Q6W3E5 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 SCARNA2-201ENST00000458748 420 ntBASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 AC009078.2-202ENST00000463353 338 ntBASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.79■□□□□ 0.44
GDPD4Q6W3E5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 FDX1P1-201ENST00000449115 551 ntBASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 FAM197Y8-203ENST00000450145 560 ntBASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 TP73-AS1-207ENST00000624167 988 ntBASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 PMPCAP1-201ENST00000508114 1576 ntBASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.78■□□□□ 0.44
GDPD4Q6W3E5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
GDPD4Q6W3E5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms