Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 AC093214.1-201ENST00000511688 1107 ntBASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
VPS13DQ5THJ4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
VPS13DQ5THJ4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 CRYGEP-201ENST00000412192 528 ntBASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 HNRNPFP1-201ENST00000391730 1133 ntBASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 TFAMP1-201ENST00000412727 736 ntBASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 AC007274.1-201ENST00000439805 662 ntBASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 AC002472.2-201ENST00000442739 958 ntBASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 REXO1L3P-201ENST00000622202 1288 ntBASIC11.81□□□□□ -0.52
VPS13DQ5THJ4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms