Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 LINC00167-201ENST00000530583 1419 ntBASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 AGGF1P2-201ENST00000426656 2106 ntBASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LINC00242Q5T6M2 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 AP005242.2-201ENST00000580065 1175 ntBASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 REXO1L10P-201ENST00000615707 1290 ntBASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 AL359736.2-201ENST00000621992 437 ntBASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 REXO1L12P-201ENST00000622156 912 ntBASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LINC00242Q5T6M2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
LINC00242Q5T6M2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
LINC00242Q5T6M2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.15□□□□□ -0.47
LINC00242Q5T6M2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 ID1-201ENST00000376105 1233 ntBASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 PHB2-202ENST00000440277 996 ntTSL 5 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 DDX43P3-201ENST00000441064 443 ntBASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
LINC00242Q5T6M2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms