Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LRRK2Q5S007 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LRRK2Q5S007 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 AL512638.1-201ENST00000457493 794 ntBASIC15.26■□□□□ 0.03
LRRK2Q5S007 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 AC007952.6-201ENST00000573168 2673 ntBASIC15.26■□□□□ 0.03
LRRK2Q5S007 AC003957.1-201ENST00000625108 2673 ntBASIC15.26■□□□□ 0.03
LRRK2Q5S007 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LRRK2Q5S007 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LRRK2Q5S007 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 RN7SL589P-201ENST00000481268 310 ntBASIC15.25■□□□□ 0.03
LRRK2Q5S007 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRK2Q5S007 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRK2Q5S007 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRK2Q5S007 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.25■□□□□ 0.03
LRRK2Q5S007 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRK2Q5S007 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRK2Q5S007 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 AL512384.1-201ENST00000406683 331 ntBASIC15.25■□□□□ 0.03
LRRK2Q5S007 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 KRT17P7-201ENST00000451704 1104 ntBASIC15.25■□□□□ 0.03
LRRK2Q5S007 FAM8A2P-201ENST00000528813 1142 ntBASIC15.25■□□□□ 0.03
LRRK2Q5S007 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRK2Q5S007 GNAS-203ENST00000306120 1878 ntBASIC15.25■□□□□ 0.03
LRRK2Q5S007 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRK2Q5S007 AL049812.1-201ENST00000432563 2267 ntBASIC15.25■□□□□ 0.03
LRRK2Q5S007 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRK2Q5S007 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 AL353593.2-201ENST00000602529 1483 ntBASIC15.24■□□□□ 0.03
LRRK2Q5S007 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 AC022144.1-201ENST00000602255 1580 ntBASIC15.24■□□□□ 0.03
LRRK2Q5S007 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRK2Q5S007 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
LRRK2Q5S007 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.23■□□□□ 0.03
LRRK2Q5S007 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRK2Q5S007 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRK2Q5S007 CXCL1P1-201ENST00000502804 216 ntBASIC15.23■□□□□ 0.03
LRRK2Q5S007 AC243562.1-201ENST00000560672 389 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms