Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
CHRFAM7AQ494W8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
CHRFAM7AQ494W8 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC15.58■□□□□ 0.09
CHRFAM7AQ494W8 AC008556.1-201ENST00000610908 2040 ntBASIC15.58■□□□□ 0.09
CHRFAM7AQ494W8 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.58■□□□□ 0.09
CHRFAM7AQ494W8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 AP000593.1-201ENST00000393668 712 ntBASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 LINC01711-201ENST00000598340 967 ntBASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 MYLKP1-201ENST00000509077 1580 ntBASIC15.58■□□□□ 0.08
CHRFAM7AQ494W8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 HBZP1-201ENST00000354915 429 ntBASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 AL022342.1-201ENST00000400363 863 ntBASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 FLJ13224-201ENST00000313737 1514 ntBASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CHRFAM7AQ494W8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 AC012313.1-201ENST00000593393 3059 ntBASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRFAM7AQ494W8 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms