Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.83■□□□□ 0.28
GABREP78334 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.83■□□□□ 0.28
GABREP78334 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 ELK2BP-201ENST00000415014 1224 ntBASIC16.83■□□□□ 0.28
GABREP78334 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
GABREP78334 CNN2P11-201ENST00000429351 262 ntBASIC16.83■□□□□ 0.28
GABREP78334 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
GABREP78334 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 AC010460.3-201ENST00000511359 1579 ntBASIC16.83■□□□□ 0.28
GABREP78334 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
GABREP78334 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 AC018845.2-201ENST00000568326 409 ntBASIC16.83■□□□□ 0.28
GABREP78334 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.83■□□□□ 0.28
GABREP78334 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 C20orf181-201ENST00000623918 480 ntBASIC16.83■□□□□ 0.28
GABREP78334 AC073592.5-201ENST00000624854 528 ntBASIC16.83■□□□□ 0.28
GABREP78334 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
GABREP78334 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
GABREP78334 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.82■□□□□ 0.28
GABREP78334 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.82■□□□□ 0.28
GABREP78334 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.82■□□□□ 0.28
GABREP78334 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.82■□□□□ 0.28
GABREP78334 AC096633.1-201ENST00000422446 749 ntBASIC16.82■□□□□ 0.28
GABREP78334 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
GABREP78334 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.82■□□□□ 0.28
GABREP78334 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.82■□□□□ 0.28
GABREP78334 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
GABREP78334 AL078644.1-201ENST00000609881 752 ntBASIC16.82■□□□□ 0.28
GABREP78334 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.82■□□□□ 0.28
GABREP78334 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.82■□□□□ 0.28
GABREP78334 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GABREP78334 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 GMCL1P1-201ENST00000463439 1581 ntBASIC16.81■□□□□ 0.28
GABREP78334 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
GABREP78334 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.81■□□□□ 0.28
GABREP78334 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GABREP78334 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.81■□□□□ 0.28
GABREP78334 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
GABREP78334 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.81■□□□□ 0.28
GABREP78334 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.81■□□□□ 0.28
GABREP78334 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.81■□□□□ 0.28
GABREP78334 AL645939.2-201ENST00000427340 991 ntBASIC16.81■□□□□ 0.28
GABREP78334 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.81■□□□□ 0.28
GABREP78334 AC108073.2-201ENST00000464002 357 ntBASIC16.81■□□□□ 0.28
GABREP78334 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
GABREP78334 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.81■□□□□ 0.28
GABREP78334 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.81■□□□□ 0.28
GABREP78334 AC004706.3-202ENST00000621574 984 ntBASIC16.81■□□□□ 0.28
GABREP78334 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.81■□□□□ 0.28
GABREP78334 AC132938.6-201ENST00000623828 1655 ntBASIC16.81■□□□□ 0.28
GABREP78334 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.81■□□□□ 0.28
GABREP78334 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GABREP78334 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
GABREP78334 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.8■□□□□ 0.28
GABREP78334 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GABREP78334 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms