Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.9■□□□□ 0.94
RHBDL3P58872 YBX2P1-201ENST00000394192 760 ntBASIC20.9■□□□□ 0.94
RHBDL3P58872 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHBDL3P58872 IGHV3-52-201ENST00000519770 353 ntBASIC20.9■□□□□ 0.94
RHBDL3P58872 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
RHBDL3P58872 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.9■□□□□ 0.94
RHBDL3P58872 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.9■□□□□ 0.94
RHBDL3P58872 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.9■□□□□ 0.94
RHBDL3P58872 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.9■□□□□ 0.94
RHBDL3P58872 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHBDL3P58872 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RHBDL3P58872 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHBDL3P58872 AC138028.4-201ENST00000564984 1845 ntBASIC20.9■□□□□ 0.94
RHBDL3P58872 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.9■□□□□ 0.94
RHBDL3P58872 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RHBDL3P58872 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.89■□□□□ 0.94
RHBDL3P58872 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RHBDL3P58872 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RHBDL3P58872 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RHBDL3P58872 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
RHBDL3P58872 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.89■□□□□ 0.94
RHBDL3P58872 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RHBDL3P58872 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.89■□□□□ 0.94
RHBDL3P58872 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
RHBDL3P58872 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.89■□□□□ 0.93
RHBDL3P58872 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 AC040169.1-201ENST00000565382 521 ntBASIC20.89■□□□□ 0.93
RHBDL3P58872 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.89■□□□□ 0.93
RHBDL3P58872 AC064836.3-201ENST00000607928 673 ntBASIC20.89■□□□□ 0.93
RHBDL3P58872 AC055717.3-201ENST00000622967 595 ntBASIC20.89■□□□□ 0.93
RHBDL3P58872 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.89■□□□□ 0.93
RHBDL3P58872 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.89■□□□□ 0.93
RHBDL3P58872 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
RHBDL3P58872 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.89■□□□□ 0.93
RHBDL3P58872 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RHBDL3P58872 BICD1-207ENST00000551848 1962 ntBASIC20.88■□□□□ 0.93
RHBDL3P58872 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RHBDL3P58872 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RHBDL3P58872 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RHBDL3P58872 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
RHBDL3P58872 RPSAP43-201ENST00000402237 625 ntBASIC20.88■□□□□ 0.93
RHBDL3P58872 RNA5SP416-201ENST00000516838 111 ntBASIC20.88■□□□□ 0.93
RHBDL3P58872 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.88■□□□□ 0.93
RHBDL3P58872 IGHV3-65-201ENST00000523210 341 ntBASIC20.88■□□□□ 0.93
RHBDL3P58872 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.88■□□□□ 0.93
RHBDL3P58872 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.88■□□□□ 0.93
RHBDL3P58872 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.88■□□□□ 0.93
RHBDL3P58872 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.88■□□□□ 0.93
RHBDL3P58872 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.88■□□□□ 0.93
RHBDL3P58872 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.88■□□□□ 0.93
RHBDL3P58872 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.88■□□□□ 0.93
RHBDL3P58872 REXO1L11P-201ENST00000620964 1927 ntBASIC20.88■□□□□ 0.93
RHBDL3P58872 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
RHBDL3P58872 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.87■□□□□ 0.93
RHBDL3P58872 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.87■□□□□ 0.93
RHBDL3P58872 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.87■□□□□ 0.93
RHBDL3P58872 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.87■□□□□ 0.93
RHBDL3P58872 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.87■□□□□ 0.93
RHBDL3P58872 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.87■□□□□ 0.93
RHBDL3P58872 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.87■□□□□ 0.93
RHBDL3P58872 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.87■□□□□ 0.93
RHBDL3P58872 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.87■□□□□ 0.93
RHBDL3P58872 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 AC108073.2-201ENST00000464002 357 ntBASIC20.87■□□□□ 0.93
RHBDL3P58872 RPS15P9-201ENST00000494093 319 ntBASIC20.87■□□□□ 0.93
RHBDL3P58872 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.87■□□□□ 0.93
RHBDL3P58872 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.87■□□□□ 0.93
RHBDL3P58872 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.87■□□□□ 0.93
RHBDL3P58872 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.87■□□□□ 0.93
RHBDL3P58872 AL353135.1-201ENST00000606729 504 ntBASIC20.87■□□□□ 0.93
RHBDL3P58872 AC008667.4-201ENST00000607370 168 ntBASIC20.87■□□□□ 0.93
RHBDL3P58872 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RHBDL3P58872 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.87■□□□□ 0.93
RHBDL3P58872 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.87■□□□□ 0.93
RHBDL3P58872 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
RHBDL3P58872 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RHBDL3P58872 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.87■□□□□ 0.93
RHBDL3P58872 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.87■□□□□ 0.93
RHBDL3P58872 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
RHBDL3P58872 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RHBDL3P58872 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms