Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 FDX1P1-201ENST00000449115 551 ntBASIC13.01□□□□□ -0.33
APOC4P55056 FAM197Y8-203ENST00000450145 560 ntBASIC13.01□□□□□ -0.33
APOC4P55056 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC4P55056 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.01□□□□□ -0.33
APOC4P55056 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
APOC4P55056 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 AF238378.1-201ENST00000526806 358 ntBASIC13.01□□□□□ -0.33
APOC4P55056 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.01□□□□□ -0.33
APOC4P55056 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 AL773604.1-201ENST00000617417 272 ntBASIC13.01□□□□□ -0.33
APOC4P55056 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOC4P55056 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.01□□□□□ -0.33
APOC4P55056 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.01□□□□□ -0.33
APOC4P55056 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 FLYWCH1P1-201ENST00000460917 1874 ntBASIC13.01□□□□□ -0.33
APOC4P55056 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
APOC4P55056 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOC4P55056 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
APOC4P55056 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
APOC4P55056 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 SP100-208ENST00000427101 1922 ntTSL 2 BASIC13□□□□□ -0.33
APOC4P55056 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
APOC4P55056 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13□□□□□ -0.33
APOC4P55056 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13□□□□□ -0.33
APOC4P55056 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13□□□□□ -0.33
APOC4P55056 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 KRT18P67-201ENST00000432816 1264 ntBASIC13□□□□□ -0.33
APOC4P55056 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13□□□□□ -0.33
APOC4P55056 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 AC104692.2-201ENST00000603054 253 ntBASIC13□□□□□ -0.33
APOC4P55056 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC13□□□□□ -0.33
APOC4P55056 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13□□□□□ -0.33
APOC4P55056 AL139288.1-201ENST00000623748 933 ntBASIC13□□□□□ -0.33
APOC4P55056 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13□□□□□ -0.33
APOC4P55056 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
APOC4P55056 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
APOC4P55056 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13□□□□□ -0.33
APOC4P55056 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC12.99□□□□□ -0.33
APOC4P55056 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC4P55056 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 AC135776.1-201ENST00000319817 2481 ntBASIC12.99□□□□□ -0.33
APOC4P55056 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC4P55056 AP005117.1-201ENST00000584346 1413 ntBASIC12.99□□□□□ -0.33
APOC4P55056 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 KRT8P47-201ENST00000604727 1398 ntBASIC12.99□□□□□ -0.33
APOC4P55056 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
APOC4P55056 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.99□□□□□ -0.33
APOC4P55056 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.99□□□□□ -0.33
APOC4P55056 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.99□□□□□ -0.33
APOC4P55056 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.99□□□□□ -0.33
APOC4P55056 AP001005.1-201ENST00000571755 1248 ntBASIC12.99□□□□□ -0.33
APOC4P55056 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.99□□□□□ -0.33
APOC4P55056 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
APOC4P55056 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.99□□□□□ -0.33
APOC4P55056 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.99□□□□□ -0.33
APOC4P55056 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC4P55056 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC4P55056 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms