Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
GTF2A2P52657 PAWRP1-201ENST00000451083 565 ntBASIC20.33■□□□□ 0.85
GTF2A2P52657 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
GTF2A2P52657 AC068137.2-201ENST00000605408 478 ntBASIC20.33■□□□□ 0.85
GTF2A2P52657 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
GTF2A2P52657 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.33■□□□□ 0.84
GTF2A2P52657 AL121761.2-201ENST00000598007 1648 ntBASIC20.33■□□□□ 0.84
GTF2A2P52657 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
GTF2A2P52657 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
GTF2A2P52657 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.33■□□□□ 0.84
GTF2A2P52657 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GTF2A2P52657 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.33■□□□□ 0.84
GTF2A2P52657 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.32■□□□□ 0.84
GTF2A2P52657 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF2A2P52657 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.32■□□□□ 0.84
GTF2A2P52657 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
GTF2A2P52657 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF2A2P52657 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GTF2A2P52657 LINC00982-205ENST00000420957 435 ntBASIC20.32■□□□□ 0.84
GTF2A2P52657 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.32■□□□□ 0.84
GTF2A2P52657 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF2A2P52657 CXCL1P1-201ENST00000502804 216 ntBASIC20.32■□□□□ 0.84
GTF2A2P52657 IGHV3-52-201ENST00000519770 353 ntBASIC20.32■□□□□ 0.84
GTF2A2P52657 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.32■□□□□ 0.84
GTF2A2P52657 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC20.32■□□□□ 0.84
GTF2A2P52657 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.32■□□□□ 0.84
GTF2A2P52657 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF2A2P52657 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF2A2P52657 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF2A2P52657 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GTF2A2P52657 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
GTF2A2P52657 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.31■□□□□ 0.84
GTF2A2P52657 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.31■□□□□ 0.84
GTF2A2P52657 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.31■□□□□ 0.84
GTF2A2P52657 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GTF2A2P52657 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GTF2A2P52657 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GTF2A2P52657 AC009336.1-201ENST00000608941 1553 ntBASIC20.31■□□□□ 0.84
GTF2A2P52657 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GTF2A2P52657 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 CBR1-202ENST00000399191 838 ntTSL 3 BASIC20.31■□□□□ 0.84
GTF2A2P52657 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.31■□□□□ 0.84
GTF2A2P52657 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.31■□□□□ 0.84
GTF2A2P52657 AC023141.5-201ENST00000458585 616 ntBASIC20.31■□□□□ 0.84
GTF2A2P52657 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC20.31■□□□□ 0.84
GTF2A2P52657 AC109322.1-201ENST00000524499 1264 ntBASIC20.31■□□□□ 0.84
GTF2A2P52657 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.31■□□□□ 0.84
GTF2A2P52657 AC022145.2-201ENST00000598203 171 ntBASIC20.31■□□□□ 0.84
GTF2A2P52657 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
GTF2A2P52657 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.31■□□□□ 0.84
GTF2A2P52657 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GTF2A2P52657 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.31■□□□□ 0.84
GTF2A2P52657 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GTF2A2P52657 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
GTF2A2P52657 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.3■□□□□ 0.84
GTF2A2P52657 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
GTF2A2P52657 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.3■□□□□ 0.84
GTF2A2P52657 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.3■□□□□ 0.84
GTF2A2P52657 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.3■□□□□ 0.84
GTF2A2P52657 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
GTF2A2P52657 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.3■□□□□ 0.84
GTF2A2P52657 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.3■□□□□ 0.84
GTF2A2P52657 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
GTF2A2P52657 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
GTF2A2P52657 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.3■□□□□ 0.84
GTF2A2P52657 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.3■□□□□ 0.84
GTF2A2P52657 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.3■□□□□ 0.84
GTF2A2P52657 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.3■□□□□ 0.84
GTF2A2P52657 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.3■□□□□ 0.84
GTF2A2P52657 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.3■□□□□ 0.84
GTF2A2P52657 LINC00628-201ENST00000628516 1289 ntBASIC20.3■□□□□ 0.84
GTF2A2P52657 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
GTF2A2P52657 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GTF2A2P52657 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms