Protein–RNA interactions for Protein: P51858

HDGF, Hepatoma-derived growth factor, humanhuman

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP51858 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
HDGFP51858 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC24.97■■□□□ 1.59
HDGFP51858 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
HDGFP51858 FAM185BP-201ENST00000443595 716 ntBASIC24.97■■□□□ 1.59
HDGFP51858 AC023141.5-201ENST00000458585 616 ntBASIC24.97■■□□□ 1.59
HDGFP51858 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC24.97■■□□□ 1.59
HDGFP51858 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC24.97■■□□□ 1.59
HDGFP51858 AC022145.2-201ENST00000598203 171 ntBASIC24.97■■□□□ 1.59
HDGFP51858 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC24.97■■□□□ 1.59
HDGFP51858 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC24.97■■□□□ 1.59
HDGFP51858 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
HDGFP51858 AC126763.1-201ENST00000552015 2118 ntBASIC24.97■■□□□ 1.59
HDGFP51858 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC24.96■■□□□ 1.59
HDGFP51858 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 CBR1-202ENST00000399191 838 ntTSL 3 BASIC24.96■■□□□ 1.59
HDGFP51858 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 AC002558.1-201ENST00000488906 803 ntBASIC24.96■■□□□ 1.59
HDGFP51858 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 AC112191.1-201ENST00000523689 701 ntBASIC24.96■■□□□ 1.59
HDGFP51858 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
HDGFP51858 AC073592.3-201ENST00000625118 1834 ntBASIC24.96■■□□□ 1.59
HDGFP51858 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.95■■□□□ 1.59
HDGFP51858 AL031598.1-201ENST00000561511 1773 ntBASIC24.95■■□□□ 1.59
HDGFP51858 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
HDGFP51858 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
HDGFP51858 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
HDGFP51858 ACTG1P4-201ENST00000425123 1122 ntBASIC24.95■■□□□ 1.58
HDGFP51858 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC24.95■■□□□ 1.58
HDGFP51858 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC24.95■■□□□ 1.58
HDGFP51858 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC24.95■■□□□ 1.58
HDGFP51858 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC24.95■■□□□ 1.58
HDGFP51858 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
HDGFP51858 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC24.95■■□□□ 1.58
HDGFP51858 LINC00628-201ENST00000628516 1289 ntBASIC24.95■■□□□ 1.58
HDGFP51858 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 EFTUD1P1-204ENST00000560401 1798 ntBASIC24.95■■□□□ 1.58
HDGFP51858 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
HDGFP51858 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC24.95■■□□□ 1.58
HDGFP51858 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC24.95■■□□□ 1.58
HDGFP51858 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
HDGFP51858 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
HDGFP51858 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.58
HDGFP51858 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HDGFP51858 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HDGFP51858 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
HDGFP51858 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
HDGFP51858 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC24.94■■□□□ 1.58
HDGFP51858 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
HDGFP51858 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
HDGFP51858 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC24.94■■□□□ 1.58
HDGFP51858 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC24.94■■□□□ 1.58
HDGFP51858 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC24.94■■□□□ 1.58
HDGFP51858 AC015911.4-201ENST00000588022 1070 ntBASIC24.94■■□□□ 1.58
HDGFP51858 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
HDGFP51858 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
HDGFP51858 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
HDGFP51858 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC24.93■■□□□ 1.58
HDGFP51858 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 HLA-DRB6-201ENST00000411500 1235 ntBASIC24.93■■□□□ 1.58
HDGFP51858 FAM86GP-201ENST00000448322 971 ntBASIC24.93■■□□□ 1.58
HDGFP51858 GATB-205ENST00000508611 605 ntTSL 2 BASIC24.93■■□□□ 1.58
HDGFP51858 RNA5SP421-201ENST00000516864 134 ntBASIC24.93■■□□□ 1.58
HDGFP51858 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC24.93■■□□□ 1.58
HDGFP51858 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC24.93■■□□□ 1.58
HDGFP51858 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC24.93■■□□□ 1.58
HDGFP51858 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
HDGFP51858 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
HDGFP51858 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
HDGFP51858 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms