Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC9A3P48764 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC9A3P48764 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC9A3P48764 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC9A3P48764 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.33■□□□□ 0.2
SLC9A3P48764 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLC9A3P48764 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLC9A3P48764 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC9A3P48764 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC9A3P48764 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SLC9A3P48764 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLC9A3P48764 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLC9A3P48764 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC9A3P48764 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.33■□□□□ 0.2
SLC9A3P48764 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.33■□□□□ 0.2
SLC9A3P48764 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SLC9A3P48764 OR6D1P-203ENST00000641209 4860 ntBASIC16.32■□□□□ 0.2
SLC9A3P48764 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC9A3P48764 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SLC9A3P48764 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC9A3P48764 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC9A3P48764 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.32■□□□□ 0.2
SLC9A3P48764 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC9A3P48764 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.32■□□□□ 0.2
SLC9A3P48764 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SLC9A3P48764 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC9A3P48764 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
SLC9A3P48764 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC9A3P48764 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 AC132938.6-201ENST00000623828 1655 ntBASIC16.31■□□□□ 0.2
SLC9A3P48764 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC9A3P48764 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SLC9A3P48764 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC9A3P48764 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SLC9A3P48764 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC9A3P48764 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC9A3P48764 ECEL1P2-202ENST00000465689 757 ntBASIC16.31■□□□□ 0.2
SLC9A3P48764 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC9A3P48764 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC9A3P48764 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC9A3P48764 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC9A3P48764 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC9A3P48764 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC9A3P48764 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLC9A3P48764 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 AC068418.2-201ENST00000577309 3703 ntBASIC16.31■□□□□ 0.2
SLC9A3P48764 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SLC9A3P48764 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC9A3P48764 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC9A3P48764 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC9A3P48764 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms