Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 BX276092.5-203ENST00000456199 560 ntBASIC15.83■□□□□ 0.12
CSNK1A1P48729 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 KRT8P26-201ENST00000534154 1276 ntBASIC15.83■□□□□ 0.12
CSNK1A1P48729 AC090616.6-201ENST00000582640 721 ntBASIC15.83■□□□□ 0.12
CSNK1A1P48729 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 IGHV3-41-201ENST00000613121 348 ntBASIC15.83■□□□□ 0.12
CSNK1A1P48729 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.83■□□□□ 0.12
CSNK1A1P48729 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSNK1A1P48729 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 AC009949.1-201ENST00000623048 1830 ntBASIC15.82■□□□□ 0.12
CSNK1A1P48729 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 PCED1CP-201ENST00000419887 785 ntBASIC15.82■□□□□ 0.12
CSNK1A1P48729 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 KRT18P35-201ENST00000510488 1269 ntBASIC15.82■□□□□ 0.12
CSNK1A1P48729 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 AL121672.3-201ENST00000608644 468 ntBASIC15.82■□□□□ 0.12
CSNK1A1P48729 AL592071.1-201ENST00000611956 408 ntBASIC15.82■□□□□ 0.12
CSNK1A1P48729 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 LTB4R2-202ENST00000528054 3092 ntBASIC15.82■□□□□ 0.12
CSNK1A1P48729 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CSNK1A1P48729 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSNK1A1P48729 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 IER3-202ENST00000376377 1350 ntBASIC15.81■□□□□ 0.12
CSNK1A1P48729 MIR1224-201ENST00000408193 85 ntBASIC15.81■□□□□ 0.12
CSNK1A1P48729 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 DDX43P3-201ENST00000441064 443 ntBASIC15.81■□□□□ 0.12
CSNK1A1P48729 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSNK1A1P48729 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.81■□□□□ 0.12
CSNK1A1P48729 AC010331.1-201ENST00000611423 582 ntBASIC15.81■□□□□ 0.12
CSNK1A1P48729 AC124864.1-201ENST00000623408 392 ntBASIC15.81■□□□□ 0.12
CSNK1A1P48729 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms