Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.79■□□□□ 0.76
HTTP42858 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.79■□□□□ 0.76
HTTP42858 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HTTP42858 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HTTP42858 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
HTTP42858 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.78■□□□□ 0.76
HTTP42858 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
HTTP42858 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 TREML5P-201ENST00000421694 576 ntBASIC19.78■□□□□ 0.76
HTTP42858 ATP5G2P4-201ENST00000442175 420 ntBASIC19.78■□□□□ 0.76
HTTP42858 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.78■□□□□ 0.76
HTTP42858 AL390754.1-201ENST00000619088 582 ntBASIC19.78■□□□□ 0.76
HTTP42858 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HTTP42858 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HTTP42858 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HTTP42858 AC010336.2-201ENST00000564226 506 ntBASIC19.78■□□□□ 0.76
HTTP42858 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.78■□□□□ 0.76
HTTP42858 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HTTP42858 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HTTP42858 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HTTP42858 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HTTP42858 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.77■□□□□ 0.76
HTTP42858 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.77■□□□□ 0.76
HTTP42858 AC245100.3-201ENST00000441281 285 ntBASIC19.77■□□□□ 0.76
HTTP42858 AC069335.1-201ENST00000489972 472 ntBASIC19.77■□□□□ 0.76
HTTP42858 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.77■□□□□ 0.76
HTTP42858 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.77■□□□□ 0.76
HTTP42858 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.77■□□□□ 0.76
HTTP42858 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HTTP42858 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HTTP42858 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HTTP42858 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HTTP42858 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HTTP42858 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HTTP42858 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
HTTP42858 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.77■□□□□ 0.76
HTTP42858 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.77■□□□□ 0.76
HTTP42858 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.77■□□□□ 0.76
HTTP42858 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.77■□□□□ 0.76
HTTP42858 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
HTTP42858 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HTTP42858 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC19.76■□□□□ 0.75
HTTP42858 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.76■□□□□ 0.75
HTTP42858 RN7SL692P-201ENST00000464677 288 ntBASIC19.76■□□□□ 0.75
HTTP42858 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.76■□□□□ 0.75
HTTP42858 AC019129.2-201ENST00000609837 1235 ntBASIC19.76■□□□□ 0.75
HTTP42858 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
HTTP42858 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.76■□□□□ 0.75
HTTP42858 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HTTP42858 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.76■□□□□ 0.75
HTTP42858 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
HTTP42858 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.76■□□□□ 0.75
HTTP42858 AL135744.1-201ENST00000565098 629 ntBASIC19.76■□□□□ 0.75
HTTP42858 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.76■□□□□ 0.75
HTTP42858 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
HTTP42858 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.76■□□□□ 0.75
HTTP42858 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HTTP42858 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.76■□□□□ 0.75
HTTP42858 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
HTTP42858 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.76■□□□□ 0.75
HTTP42858 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HTTP42858 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HTTP42858 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTTP42858 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
HTTP42858 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.75■□□□□ 0.75
HTTP42858 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms