Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PRPHP41219 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.06■□□□□ 0.8
PRPHP41219 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.06■□□□□ 0.8
PRPHP41219 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.06■□□□□ 0.8
PRPHP41219 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.06■□□□□ 0.8
PRPHP41219 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
PRPHP41219 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.06■□□□□ 0.8
PRPHP41219 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.06■□□□□ 0.8
PRPHP41219 HTR7P1-202ENST00000624664 4411 ntBASIC20.06■□□□□ 0.8
PRPHP41219 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.06■□□□□ 0.8
PRPHP41219 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRPHP41219 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PRPHP41219 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PRPHP41219 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC20.05■□□□□ 0.8
PRPHP41219 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PRPHP41219 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
PRPHP41219 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
PRPHP41219 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PRPHP41219 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.05■□□□□ 0.8
PRPHP41219 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PRPHP41219 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.05■□□□□ 0.8
PRPHP41219 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.05■□□□□ 0.8
PRPHP41219 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.05■□□□□ 0.8
PRPHP41219 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.05■□□□□ 0.8
PRPHP41219 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.05■□□□□ 0.8
PRPHP41219 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRPHP41219 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
PRPHP41219 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPHP41219 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRPHP41219 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRPHP41219 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PRPHP41219 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.04■□□□□ 0.8
PRPHP41219 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 AC007967.3-201ENST00000434308 558 ntBASIC20.04■□□□□ 0.8
PRPHP41219 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.04■□□□□ 0.8
PRPHP41219 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.04■□□□□ 0.8
PRPHP41219 VENTXP7-201ENST00000475503 772 ntBASIC20.04■□□□□ 0.8
PRPHP41219 TPSP2-201ENST00000561760 610 ntBASIC20.04■□□□□ 0.8
PRPHP41219 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPHP41219 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.04■□□□□ 0.8
PRPHP41219 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.04■□□□□ 0.8
PRPHP41219 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPHP41219 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.04■□□□□ 0.8
PRPHP41219 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.04■□□□□ 0.8
PRPHP41219 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPHP41219 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPHP41219 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRPHP41219 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.04■□□□□ 0.8
PRPHP41219 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
PRPHP41219 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PRPHP41219 AL138688.1-201ENST00000624851 1594 ntBASIC20.04■□□□□ 0.8
PRPHP41219 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
PRPHP41219 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.03■□□□□ 0.8
PRPHP41219 KRT18P1-202ENST00000452408 1331 ntBASIC20.03■□□□□ 0.8
PRPHP41219 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPHP41219 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPHP41219 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPHP41219 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPHP41219 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.03■□□□□ 0.8
PRPHP41219 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPHP41219 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPHP41219 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PRPHP41219 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.03■□□□□ 0.8
PRPHP41219 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PRPHP41219 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.03■□□□□ 0.8
PRPHP41219 AP005901.3-202ENST00000581653 237 ntBASIC20.03■□□□□ 0.8
PRPHP41219 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.03■□□□□ 0.8
PRPHP41219 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms