Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RFC5P40937 AL356309.3-201ENST00000624132 1934 ntBASIC19.57■□□□□ 0.72
RFC5P40937 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC5P40937 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC5P40937 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
RFC5P40937 AL353593.2-201ENST00000602529 1483 ntBASIC19.57■□□□□ 0.72
RFC5P40937 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RFC5P40937 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.57■□□□□ 0.72
RFC5P40937 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC5P40937 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.57■□□□□ 0.72
RFC5P40937 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC5P40937 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.57■□□□□ 0.72
RFC5P40937 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC5P40937 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 AL139288.1-201ENST00000623748 933 ntBASIC19.57■□□□□ 0.72
RFC5P40937 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RFC5P40937 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.57■□□□□ 0.72
RFC5P40937 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC5P40937 SIRPAP1-201ENST00000448467 1770 ntBASIC19.57■□□□□ 0.72
RFC5P40937 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.57■□□□□ 0.72
RFC5P40937 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFC5P40937 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.57■□□□□ 0.72
RFC5P40937 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
RFC5P40937 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.56■□□□□ 0.72
RFC5P40937 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 MRPL3P1-201ENST00000400109 1033 ntBASIC19.56■□□□□ 0.72
RFC5P40937 KRT18P67-201ENST00000432816 1264 ntBASIC19.56■□□□□ 0.72
RFC5P40937 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.56■□□□□ 0.72
RFC5P40937 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
RFC5P40937 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 AF186996.4-201ENST00000467186 377 ntBASIC19.56■□□□□ 0.72
RFC5P40937 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RFC5P40937 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.56■□□□□ 0.72
RFC5P40937 AC019129.2-201ENST00000609837 1235 ntBASIC19.56■□□□□ 0.72
RFC5P40937 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 AC007613.1-201ENST00000572811 2597 ntBASIC19.56■□□□□ 0.72
RFC5P40937 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 AL049757.1-201ENST00000616842 1596 ntBASIC19.56■□□□□ 0.72
RFC5P40937 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.56■□□□□ 0.72
RFC5P40937 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.56■□□□□ 0.72
RFC5P40937 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFC5P40937 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC5P40937 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RFC5P40937 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC5P40937 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC5P40937 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 SLC25A6P5-201ENST00000435663 894 ntBASIC19.55■□□□□ 0.72
RFC5P40937 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC5P40937 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.55■□□□□ 0.72
RFC5P40937 AC073648.2-201ENST00000510116 352 ntBASIC19.55■□□□□ 0.72
RFC5P40937 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC5P40937 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC5P40937 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.55■□□□□ 0.72
RFC5P40937 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
RFC5P40937 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.55■□□□□ 0.72
RFC5P40937 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RFC5P40937 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RFC5P40937 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RFC5P40937 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFC5P40937 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms