Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC14.66□□□□□ -0.06
SNCAP37840 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.66□□□□□ -0.06
SNCAP37840 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.66□□□□□ -0.06
SNCAP37840 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.66□□□□□ -0.06
SNCAP37840 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC14.66□□□□□ -0.06
SNCAP37840 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SNCAP37840 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
SNCAP37840 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.66□□□□□ -0.06
SNCAP37840 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.66□□□□□ -0.06
SNCAP37840 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
SNCAP37840 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SNCAP37840 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.65□□□□□ -0.06
SNCAP37840 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 AC105020.1-201ENST00000435356 2205 ntBASIC14.65□□□□□ -0.06
SNCAP37840 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.65□□□□□ -0.06
SNCAP37840 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SNCAP37840 AL023284.2-201ENST00000405850 579 ntBASIC14.65□□□□□ -0.06
SNCAP37840 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.65□□□□□ -0.06
SNCAP37840 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.65□□□□□ -0.06
SNCAP37840 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.65□□□□□ -0.06
SNCAP37840 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.65□□□□□ -0.06
SNCAP37840 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.65□□□□□ -0.06
SNCAP37840 DGCR10-201ENST00000609839 495 ntBASIC14.65□□□□□ -0.06
SNCAP37840 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
SNCAP37840 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC14.65□□□□□ -0.06
SNCAP37840 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.65□□□□□ -0.06
SNCAP37840 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.65□□□□□ -0.06
SNCAP37840 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SNCAP37840 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.65□□□□□ -0.06
SNCAP37840 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
SNCAP37840 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.64□□□□□ -0.07
SNCAP37840 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.64□□□□□ -0.07
SNCAP37840 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SNCAP37840 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SNCAP37840 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.64□□□□□ -0.07
SNCAP37840 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.64□□□□□ -0.07
SNCAP37840 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.64□□□□□ -0.07
SNCAP37840 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 CD177P1-201ENST00000606252 935 ntBASIC14.64□□□□□ -0.07
SNCAP37840 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.64□□□□□ -0.07
SNCAP37840 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SNCAP37840 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SNCAP37840 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms