Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.24■□□□□ 0.83
COPB2P35606 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.24■□□□□ 0.83
COPB2P35606 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.24■□□□□ 0.83
COPB2P35606 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.24■□□□□ 0.83
COPB2P35606 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.24■□□□□ 0.83
COPB2P35606 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPB2P35606 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COPB2P35606 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COPB2P35606 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
COPB2P35606 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.23■□□□□ 0.83
COPB2P35606 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.23■□□□□ 0.83
COPB2P35606 AC004832.2-201ENST00000426397 482 ntBASIC20.23■□□□□ 0.83
COPB2P35606 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.23■□□□□ 0.83
COPB2P35606 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.23■□□□□ 0.83
COPB2P35606 MIR3687-2-201ENST00000577708 61 ntBASIC20.23■□□□□ 0.83
COPB2P35606 MIR3687-1-201ENST00000614492 61 ntBASIC20.23■□□□□ 0.83
COPB2P35606 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.23■□□□□ 0.83
COPB2P35606 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
COPB2P35606 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.23■□□□□ 0.83
COPB2P35606 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPB2P35606 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.22■□□□□ 0.83
COPB2P35606 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.22■□□□□ 0.83
COPB2P35606 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.22■□□□□ 0.83
COPB2P35606 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.22■□□□□ 0.83
COPB2P35606 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 AL049757.1-201ENST00000616842 1596 ntBASIC20.22■□□□□ 0.83
COPB2P35606 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC20.22■□□□□ 0.83
COPB2P35606 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.22■□□□□ 0.83
COPB2P35606 YBX2P1-201ENST00000394192 760 ntBASIC20.22■□□□□ 0.83
COPB2P35606 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.22■□□□□ 0.83
COPB2P35606 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.22■□□□□ 0.83
COPB2P35606 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.22■□□□□ 0.83
COPB2P35606 GPX1P2-201ENST00000429271 606 ntBASIC20.22■□□□□ 0.83
COPB2P35606 AC092183.1-201ENST00000469884 875 ntBASIC20.22■□□□□ 0.83
COPB2P35606 AC108751.1-201ENST00000490852 363 ntBASIC20.22■□□□□ 0.83
COPB2P35606 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
COPB2P35606 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.22■□□□□ 0.83
COPB2P35606 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC20.22■□□□□ 0.83
COPB2P35606 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC20.22■□□□□ 0.83
COPB2P35606 AC004706.3-202ENST00000621574 984 ntBASIC20.22■□□□□ 0.83
COPB2P35606 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COPB2P35606 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 AL138781.2-201ENST00000617896 1843 ntBASIC20.22■□□□□ 0.83
COPB2P35606 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPB2P35606 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.22■□□□□ 0.83
COPB2P35606 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC20.22■□□□□ 0.83
COPB2P35606 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
COPB2P35606 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.21■□□□□ 0.83
COPB2P35606 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.21■□□□□ 0.83
COPB2P35606 NCF1C-201ENST00000438382 1427 ntBASIC20.21■□□□□ 0.83
COPB2P35606 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.21■□□□□ 0.83
COPB2P35606 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.21■□□□□ 0.83
COPB2P35606 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.21■□□□□ 0.83
COPB2P35606 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.21■□□□□ 0.83
COPB2P35606 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COPB2P35606 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.21■□□□□ 0.83
COPB2P35606 KLF4P1-201ENST00000412782 1185 ntBASIC20.21■□□□□ 0.83
COPB2P35606 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 SIGLEC30P-201ENST00000455569 941 ntBASIC20.21■□□□□ 0.83
COPB2P35606 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.21■□□□□ 0.83
COPB2P35606 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.21■□□□□ 0.83
COPB2P35606 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.21■□□□□ 0.83
COPB2P35606 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPB2P35606 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.21■□□□□ 0.83
COPB2P35606 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms