Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SLC6A4P31645 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SLC6A4P31645 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SLC6A4P31645 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC6A4P31645 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC6A4P31645 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC6A4P31645 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
SLC6A4P31645 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 AC020763.4-201ENST00000623414 4170 ntBASIC18.2■□□□□ 0.5
SLC6A4P31645 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC6A4P31645 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
SLC6A4P31645 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.2■□□□□ 0.5
SLC6A4P31645 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 AC103564.2-201ENST00000432853 1299 ntBASIC18.2■□□□□ 0.5
SLC6A4P31645 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
SLC6A4P31645 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC6A4P31645 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC6A4P31645 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
SLC6A4P31645 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC6A4P31645 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC6A4P31645 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC6A4P31645 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC6A4P31645 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.2■□□□□ 0.5
SLC6A4P31645 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.2■□□□□ 0.5
SLC6A4P31645 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SLC6A4P31645 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
SLC6A4P31645 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.2■□□□□ 0.5
SLC6A4P31645 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SLC6A4P31645 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SLC6A4P31645 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SLC6A4P31645 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SLC6A4P31645 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
SLC6A4P31645 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC6A4P31645 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
SLC6A4P31645 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC6A4P31645 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC6A4P31645 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.19■□□□□ 0.5
SLC6A4P31645 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.19■□□□□ 0.5
SLC6A4P31645 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
SLC6A4P31645 AL353593.2-201ENST00000602529 1483 ntBASIC18.19■□□□□ 0.5
SLC6A4P31645 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.19■□□□□ 0.5
SLC6A4P31645 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SLC6A4P31645 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SLC6A4P31645 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC6A4P31645 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC6A4P31645 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.18■□□□□ 0.5
SLC6A4P31645 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SLC6A4P31645 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SLC6A4P31645 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SLC6A4P31645 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SLC6A4P31645 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms