Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15□□□□□ -0.01
COL8A2P25067 AC090164.3-201ENST00000610780 2143 ntBASIC15□□□□□ -0.01
COL8A2P25067 AL355877.3-201ENST00000622820 899 ntBASIC15□□□□□ -0.01
COL8A2P25067 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15□□□□□ -0.01
COL8A2P25067 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15□□□□□ -0.01
COL8A2P25067 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15□□□□□ -0.01
COL8A2P25067 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15□□□□□ -0.01
COL8A2P25067 AP005117.1-201ENST00000584346 1413 ntBASIC15□□□□□ -0.01
COL8A2P25067 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
COL8A2P25067 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15□□□□□ -0.01
COL8A2P25067 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
COL8A2P25067 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 HLA-A-201ENST00000376802 1334 ntBASIC14.99□□□□□ -0.01
COL8A2P25067 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.99□□□□□ -0.01
COL8A2P25067 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 AC096633.1-201ENST00000422446 749 ntBASIC14.99□□□□□ -0.01
COL8A2P25067 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.99□□□□□ -0.01
COL8A2P25067 FGFR3P6-201ENST00000457012 610 ntBASIC14.99□□□□□ -0.01
COL8A2P25067 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.99□□□□□ -0.01
COL8A2P25067 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.99□□□□□ -0.01
COL8A2P25067 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
COL8A2P25067 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL8A2P25067 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
COL8A2P25067 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.99□□□□□ -0.01
COL8A2P25067 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 REXO1L9P-201ENST00000604264 2108 ntBASIC14.99□□□□□ -0.01
COL8A2P25067 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.99□□□□□ -0.01
COL8A2P25067 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.99□□□□□ -0.01
COL8A2P25067 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
COL8A2P25067 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL8A2P25067 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
COL8A2P25067 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.98□□□□□ -0.01
COL8A2P25067 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 AC010460.3-201ENST00000511359 1579 ntBASIC14.98□□□□□ -0.01
COL8A2P25067 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 AC068880.1-201ENST00000507289 2297 ntBASIC14.98□□□□□ -0.01
COL8A2P25067 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.98□□□□□ -0.01
COL8A2P25067 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 FAM220CP-201ENST00000395253 831 ntBASIC14.98□□□□□ -0.01
COL8A2P25067 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
COL8A2P25067 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.98□□□□□ -0.01
COL8A2P25067 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.98□□□□□ -0.01
COL8A2P25067 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.98□□□□□ -0.01
COL8A2P25067 AC064862.7-201ENST00000604520 867 ntBASIC14.98□□□□□ -0.01
COL8A2P25067 AC148477.8-201ENST00000624298 468 ntBASIC14.98□□□□□ -0.01
COL8A2P25067 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL8A2P25067 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms